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Schema
Citing CMDGA
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Annotation type
5
candidate regulatory elements
4
chromatin state
3
Fine-mapped variants
3
target gene predictions
2
accessible chromatin
2
eQTL
1
gene expression
1
histone modifications
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
DNase-seq
Available data
2
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
5
cardiac fibroblast
3
brain
3
brain pericyte
3
caudate nucleus
3
choroid plexus epithelial cell
3
frontal cortex
3
globus pallidus
3
medulla oblongata
3
midbrain
3
pons
3
putamen
2
Ammon's horn
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
middle frontal gyrus
1
brain microvascular endothelial cell
1
A172
1
BE(2)-C
1
Daoy
1
Glioblastoma
1
M059J
1
SK-N-DZ
1
SK-N-MC
1
U-87 MG
1
brain microvascular endothelial cell
1
cerebellar cortex
1
cerebellum
1
cerebellum (Hemisphere)
1
hippocampal neuron
1
inferior parietal cortex
1
prefrontal cortex
Organ
3
brain
Life stage
2
adult
Date released
1
January, 2020
1
June, 2020
1
May, 2020
Software used
2
macs
1
deltasvm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR569LZX
released
Annotation file set
: Accessible chromatin annotation for Neural Caudate Nucleus from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR024MBT
released
Annotation file set
: Variant allelic effects of caudate nucleus ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR775JNR
released
Annotation file set
: Accessible chromatin annotation of brain caudate nucleus from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP