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Schema
Citing CMDGA
Clear Filters
Annotation type
3
Fine-mapped variants
3
candidate regulatory elements
2
chromatin state
2
eQTL
2
gene expression
2
target gene predictions
1
accessible chromatin
1
histone modifications
Annotation Category
3
cis-regulatory elements
2
Genetic variant effects
Annotation type Category
3
ChIP-seq
3
DNase-seq
2
RNA-seq
Available data
3
bed bed3+
1
tsv
File set status
5
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
31
brain
8
substantia nigra
7
caudate nucleus
7
layer of hippocampus
5
cerebellum
5
putamen
5
temporal lobe
4
SK-N-DZ
4
SK-N-SH
4
angular gyrus
4
cingulate gyrus
4
frontal cortex
3
Ammon's horn
2
A172
2
Brodmann (1909) area 46
2
Daoy
2
H54
2
M059J
2
SK-N-MC
2
amygdala
2
anterior cingulate cortex
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
brain microvascular endothelial cell
2
cerebellar cortex
2
choroid plexus epithelial cell
2
globus pallidus
2
hypothalamus
2
middle frontal area 46
2
middle frontal gyrus
2
nucleus accumbens
1
BE(2)-C
1
BE2C
1
brain pericyte
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
dorsolateral prefrontal cortex
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
midbrain
1
pituitary gland
1
pons
Organ
5
brain
Life stage
4
adult
Date released
2
September, 2022
1
February, 2020
1
February, 2021
1
January, 2022
Software used
2
r
1
encode-ccres
1
gtex_eqtl:V8
1
qTLtools
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR872CEQ
released
Annotation file set
: Candidate regulatory elements for BSS00207 cerebellum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR159URQ
released
Annotation file set
: Candidate regulatory elements for BSS00206 cerebellum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR034OJH
released
Annotation file set
: brain cerebellum eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR943EVA
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR941KCN
released
Annotation file set
: eQTL of cerebellum for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP