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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
binding sites
2
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
34
brain
10
pituitary stalk
7
caudate nucleus
7
layer of hippocampus
7
temporal lobe
6
angular gyrus
5
SK-N-SH
5
cingulate gyrus
5
substantia nigra
4
Brodmann (1909) area 46
4
SK-N-DZ
4
cerebellum
4
frontal cortex
3
Ammon's horn
2
A172
2
BE(2)-C
2
Daoy
2
H54
2
M059J
2
SK-N-MC
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
brain microvascular endothelial cell
2
cerebellar cortex
2
choroid plexus epithelial cell
2
globus pallidus
2
inferior parietal cortex
2
medulla oblongata
2
medulloblastoma
2
midbrain
2
middle frontal gyrus
2
pons
2
putamen
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
dorsolateral prefrontal cortex
1
mid-frontal lobe
1
undifferentiated ESC (H9 cell line)
Organ
2
brain
2
epithelium
2
vasculature
Life stage
2
unknown
Date released
2
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR805XSG
released
Annotation file set
: Target gene predictions for BSS00218 choroid plexus epithelial cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR525PVH
released
Annotation file set
: Chromatin states for BSS00218 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP