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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
ChIP-seq
6
DNase-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
cell line
Biosample term
10
frontal cortex
10
pituitary stalk
10
putamen
9
caudate nucleus
8
Ammon's horn
8
cerebellum
7
substantia nigra
6
amygdala
6
anterior cingulate cortex
6
brain
6
cerebellum (Hemisphere)
6
hypothalamus
6
nucleus accumbens
5
cardiac fibroblast
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
3
brain pericyte
3
choroid plexus epithelial cell
3
dorsolateral prefrontal cortex
3
globus pallidus
3
medulla oblongata
3
midbrain
3
pons
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
hippocampal neuron
2
middle frontal gyrus
1
brain microvascular endothelial cell
1
A172
1
BE(2)-C
1
Daoy
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Glioblastoma
1
M059J
1
SK-N-DZ
1
SK-N-MC
1
SK-N-SH
1
U-87 MG
1
brain microvascular endothelial cell
1
cerebellar cortex
1
cerebellar hemisphere
1
diencephalon
1
inferior parietal cortex
1
layer of hippocampus
1
pituitary
1
pituitary gland
1
prefrontal cortex
1
temporal lobe
1
undifferentiated ESC (H9 cell line)
Organ
3
brain
3
epithelium
3
vasculature
Date released
1
January, 2020
1
June, 2020
1
May, 2020
Software used
2
macs
1
deltasvm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type_category!
ChIP-seq
Showing 3 of 3 results
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Download
FileSet
DSR237IBX
released
Annotation file set
: Accessible chromatin annotation for Neural HCPEpiC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR492TXW
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain choroid plexus cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR536GJU
released
Annotation file set
: Accessible chromatin annotation of brain choroid plexus cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP