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Schema
Citing CMDGA
Clear Filters
Annotation type
5
candidate regulatory elements
3
Fine-mapped variants
3
chromatin state
3
eQTL
2
target gene predictions
1
gene expression
1
histone modifications
Annotation Category
3
Genetic variant effects
2
Target gene links
Annotation type Category
3
RNA-seq
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
tsv
File set status
5
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
18
brain
10
pituitary stalk
5
caudate nucleus
5
substantia nigra
4
cerebellum
4
frontal cortex
4
layer of hippocampus
4
putamen
3
Ammon's horn
3
SK-N-SH
2
Brodmann (1909) area 46
2
SK-N-DZ
2
amygdala
2
angular gyrus
2
anterior cingulate cortex
2
cingulate gyrus
2
dorsolateral prefrontal cortex
2
hypothalamus
2
nucleus accumbens
2
temporal lobe
1
A172
1
BE(2)-C
1
Daoy
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
H54
1
M059J
1
SK-N-MC
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
choroid plexus epithelial cell
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
midbrain
1
middle frontal gyrus
1
pituitary gland
1
pons
1
undifferentiated ESC (H9 cell line)
Organ
5
brain
Life stage
3
adult
Date released
2
January, 2022
2
September, 2022
1
February, 2020
Software used
2
qTLtools
2
r
1
gtex_eqtl:V8
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR327SOC
released
Annotation file set
: Target gene predictions for BSS01676 substantia nigra from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR039YRY
released
Annotation file set
: Target gene predictions for BSS01675 substantia nigra from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR821QDG
released
Annotation file set
: brain substantia nigra eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR009DSA
released
Annotation file set
: substantia nigra eQTL of studay Braineac2 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR601BGX
released
Annotation file set
: eQTL of substantia nigra for GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP