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Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
53
brain
12
caudate nucleus
12
layer of hippocampus
11
temporal lobe
9
substantia nigra
8
SK-N-DZ
8
angular gyrus
8
choroid plexus epithelial cell
7
SK-N-MC
7
SK-N-SH
7
cerebellum
7
cingulate gyrus
6
BE(2)-C
6
frontal cortex
6
globus pallidus
6
midbrain
6
putamen
5
Ammon's horn
5
Daoy
4
A172
4
Brodmann (1909) area 46
4
M059J
4
U-87 MG
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
brain microvascular endothelial cell
4
cerebellar cortex
4
medulla oblongata
4
middle frontal gyrus
4
pons
3
cardiac fibroblast
3
H54
3
brain pericyte
3
inferior parietal cortex
3
medulloblastoma
3
prefrontal cortex
2
middle frontal area 46
1
BE2C
1
Brodmann (1909) area 9
1
Glioblastoma
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
cardiac fibroblast
1
claustrum of brain
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
frontal pole
1
hippocampal neuron
1
hypothalamus
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
mid-frontal lobe
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
Organ
1
brain
Life stage
1
unknown
Date released
1
January, 2022
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
organ_slims!
large intestine
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Download
FileSet
DSR721DBF
released
Annotation file set
: Accessible chromatin annotation from ATAC-seq_iPSC-derived hippocampal DG-like neurons; Homo sapiens; ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP