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Schema
Citing CMDGA
Clear Filters
Annotation type
9
candidate regulatory elements
7
target gene predictions
5
chromatin state
1
accessible chromatin
1
histone modifications
Annotation Category
7
Target gene links
Annotation type Category
7
DNase-seq
5
ChIP-seq
2
ATAC-seq
2
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
5
primary cell
2
in vitro differentiated cells
Biosample term
16
brain
15
placenta
10
pituitary stalk
7
trophoblast cell
4
chorionic villus
3
SK-N-SH
3
caudate nucleus
3
chorion membrane
3
layer of hippocampus
2
Ammon's horn
2
Brodmann (1909) area 46
2
SK-N-DZ
2
angular gyrus
2
cerebellum
2
cingulate gyrus
2
frontal cortex
2
substantia nigra
2
temporal lobe
1
A172
1
BE(2)-C
1
Daoy
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
H54
1
HTR-8/Svneo
1
M059J
1
SK-N-MC
1
amnion
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
dorsolateral prefrontal cortex
1
epithelial cell of amnion
1
fibroblast of villous mesenchyme
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
midbrain
1
middle frontal gyrus
1
pons
1
putamen
1
umbilical cord
1
undifferentiated ESC (H9 cell line)
Organ
7
embryo
7
extraembryonic component
0
brain
Life stage
5
embryonic
Date released
5
September, 2022
2
May, 2021
Software used
5
r
2
abc
Lab
5
AMP-T2D consortium
2
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
organ_slims!
ovary
Showing 7 of 7 results
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Download
FileSet
DSR046UMD
released
Annotation file set
: Target gene predictions for BSS01857 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR493RDI
released
Annotation file set
: Target gene predictions for BSS01856 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR220SQZ
released
Annotation file set
: Target gene predictions for BSS01855 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR277VMW
released
Annotation file set
: Target gene predictions for BSS01853 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR838IWD
released
Annotation file set
: Target gene predictions for BSS01852 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR630TXR
released
Annotation file set
: enhancer-gene predicton of trophoblast_cell-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR250DDG
released
Annotation file set
: enhancer-gene predicton of H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP