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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
18
brain
10
pituitary stalk
5
caudate nucleus
4
Ammon's horn
4
frontal cortex
3
cardiac fibroblast
3
SK-N-DZ
3
SK-N-SH
3
cerebellum
3
choroid plexus epithelial cell
3
globus pallidus
3
layer of hippocampus
3
medulla oblongata
3
midbrain
3
pons
3
putamen
2
A172
2
BE(2)-C
2
Brodmann (1909) area 46
2
Daoy
2
M059J
2
SK-N-MC
2
angular gyrus
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
brain microvascular endothelial cell
2
brain pericyte
2
cerebellar cortex
2
cingulate gyrus
2
inferior parietal cortex
2
middle frontal gyrus
2
substantia nigra
2
temporal lobe
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Glioblastoma
1
H54
1
U-87 MG
1
dorsolateral prefrontal cortex
1
hippocampal neuron
1
medulloblastoma
1
prefrontal cortex
1
undifferentiated ESC (H9 cell line)
Organ
2
brain
Life stage
1
unknown
Date released
1
January, 2020
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
trachea
Showing 2 of 2 results
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Download
FileSet
DSR228YYU
released
Annotation file set
: Target gene predictions for BSS00090 astrocyte of the cerebellum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR656EMP
released
Annotation file set
: Accessible chromatin annotation of brain cerebellum astrocyte from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP