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Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
4
chromatin state
4
target gene predictions
2
binding sites
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed9
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
18
brain
6
adipocyte
6
adipose tissue
5
temporal lobe
4
angular gyrus
4
caudate nucleus
4
fibroblast of lung
4
layer of hippocampus
3
cingulate gyrus
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
mesenchymal stem cell
3
substantia nigra
2
Brodmann (1909) area 46
2
SK-N-DZ
2
SK-N-SH
2
cerebellum
2
foreskin fibroblast
2
frontal cortex
2
omental fat pad
2
skin fibroblast
1
A172
1
Ammon's horn
1
BE(2)-C
1
Daoy
1
GM23248
1
H54
1
HT1080
1
M059J
1
SK-N-MC
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
globus pallidus
1
hepatic stellate cell
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
osteoblast
1
pericyte cell
1
pons
1
putamen
1
stromal cell of bone marrow
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
Organ
4
connective tissue
4
lung
0
brain
Life stage
2
unknown
1
adult
Date released
3
September, 2022
1
August, 2017
Software used
4
chromhmm
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR805FGA
released
Annotation file set
: Chromatin states for BSS00342 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR223DHC
released
Annotation file set
: Chromatin states for BSS00341 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR910XOT
released
Annotation file set
: Chromatin states for BSS00339 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR646989
released
Annotation file set
: ChromHMM 13-state model for fibroblast of lung
Lab:
Stephen Parker, UMich
Project:
AMP