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Schema
Citing CMDGA
Clear Filters
Annotation type
10
candidate regulatory elements
7
target gene predictions
5
chromatin state
1
accessible chromatin
Annotation Category
7
Target gene links
Annotation type Category
6
DNase-seq
5
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
pCHi-C
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
17
small intestine
16
brain
14
large intestine
10
pituitary stalk
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
3
Peyer's patch
3
SK-N-SH
3
caudate nucleus
3
layer of hippocampus
2
Ammon's horn
2
Brodmann (1909) area 46
2
HT-29
2
SK-N-DZ
2
angular gyrus
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
enteric smooth muscle cell
2
frontal cortex
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
substantia nigra
2
temporal lobe
1
A172
1
BE(2)-C
1
Daoy
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
H54
1
HCT-116 cell
1
M059J
1
SK-N-MC
1
SW480
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
dorsolateral prefrontal cortex
1
enterocyte of epithelium of small intestine
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
midbrain
1
middle frontal gyrus
1
paneth cell
1
pons
1
putamen
1
rectum smooth muscle tissue
1
small intestine goblet cell
1
undifferentiated ESC (H9 cell line)
Organ
7
intestine
7
large intestine
0
brain
Life stage
4
adult
1
child
Date released
5
September, 2022
1
March, 2020
1
May, 2021
Software used
5
r
1
abc
1
nospecificsoft_customcode
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
Showing 7 of 7 results
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Download
FileSet
DSR210CXW
released
Annotation file set
: Target gene predictions for BSS01548 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR120ZJL
released
Annotation file set
: Target gene predictions for BSS01547 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR255CFA
released
Annotation file set
: Target gene predictions for BSS01545 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR205RPT
released
Annotation file set
: Target gene predictions for BSS01543 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR759TNV
released
Annotation file set
: Target gene predictions for BSS01542 sigmoid colon from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR284ZHE
released
Annotation file set
: enhancer-gene predicton of sigmoid_colon-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR074OIQ
released
Annotation file set
: A target gene prediction annotation in Human Sigmoid Colon of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP