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Schema
Citing CMDGA
Clear Filters
Annotation type
2
binding sites
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
chromatin state
1
histone modifications
Annotation Category
2
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
20
A549
19
brain
17
lung
13
left lung
11
right lung
10
pituitary stalk
4
caudate nucleus
4
fibroblast of lung
4
layer of hippocampus
4
upper lobe of left lung
3
IMR-90
3
PC-9
3
SK-N-DZ
3
SK-N-SH
3
cerebellum
3
substantia nigra
3
temporal lobe
2
Ammon's horn
2
BE(2)-C
2
Brodmann (1909) area 46
2
SK-N-MC
2
angular gyrus
2
choroid plexus epithelial cell
2
cingulate gyrus
2
frontal cortex
2
globus pallidus
2
midbrain
2
putamen
2
type II pneumocyte
1
A172
1
Brodmann (1909) area 9
1
Daoy
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
H54
1
M059J
1
NCI-H226 cell
1
NCI-H460 cell
1
U-87 MG
1
WI38
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
bed nucleus of stria terminalis
1
brain microvascular endothelial cell
1
cerebellar cortex
1
claustrum of brain
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dorsolateral prefrontal cortex
1
dura mater
1
entorhinal cortex
1
frontal pole
1
hypothalamus
1
inferior parietal cortex
1
locus ceruleus
1
lung microvascular endothelial cell
1
medial dorsal nucleus of thalamus
1
medulla oblongata
1
medulloblastoma
1
middle frontal gyrus
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pons
1
pontine tegmentum
1
precentral gyrus
1
prefrontal cortex
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
1
type I pneumocyte
1
undifferentiated ESC (H9 cell line)
Organ
3
lung
0
brain
Life stage
1
embryonic
Date released
1
February, 2021
1
May, 2021
1
September, 2022
Software used
1
abc
1
macs
1
r
Lab
2
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR772ORX
released
Annotation file set
: Target gene predictions for BSS00720 IMR-90 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR843YYZ
released
Annotation file set
: Histone modifications annotation for Lung IMR-90 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR895REE
released
Annotation file set
: enhancer-gene predicton of IMR90-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP