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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
chromatin state
3
target gene predictions
1
binding sites
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
2
bed bed9
1
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
2
cell line
1
tissue
Biosample term
18
brain
16
muscle of arm
15
muscle of leg
13
muscle of back
5
temporal lobe
4
angular gyrus
4
caudate nucleus
4
gastrocnemius medialis
4
layer of hippocampus
4
muscle of trunk
4
psoas muscle
3
cingulate gyrus
3
skeletal muscle tissue
3
stomach smooth muscle
3
substantia nigra
2
Brodmann (1909) area 46
2
SK-N-DZ
2
SK-N-SH
2
cerebellum
2
esophagus muscularis mucosa
2
frontal cortex
2
rectum smooth muscle tissue
2
skeletal muscle satellite cell
1
A172
1
A673
1
Ammon's horn
1
BE(2)-C
1
Daoy
1
H54
1
LHCN-M2
1
M059J
1
SJCRH30
1
SK-N-MC
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
choroid plexus epithelial cell
1
gastroesophageal sphincter
1
globus pallidus
1
inferior parietal cortex
1
medulla oblongata
1
medulloblastoma
1
mid-frontal lobe
1
midbrain
1
middle frontal gyrus
1
pons
1
putamen
1
skeletal muscle
1
skeletal muscle cell
Disease term
2
neuroblastoma
Organ
3
brain
0
musculature of body
Life stage
2
child
Date released
2
September, 2022
1
August, 2017
Software used
3
chromhmm
Lab
2
AMP-T2D consortium
1
Stephen Parker, UMich
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR392IHQ
released
Annotation file set
: Chromatin states for BSS01571 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR829TQG
released
Annotation file set
: Chromatin states for BSS01562 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR632525
released
Annotation file set
: ChromHMM 13-state model for Mid-frontal lobe
Lab:
Stephen Parker, UMich
Project:
AMP