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Schema
Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
73
brain
67
muscle of arm
58
muscle of leg
54
muscle of back
22
caudate nucleus
20
psoas muscle
18
gastrocnemius medialis
18
substantia nigra
17
muscle of trunk
16
cerebellum
16
frontal cortex
16
layer of hippocampus
16
skeletal muscle tissue
15
putamen
14
temporal lobe
13
skeletal muscle satellite cell
12
Ammon's horn
11
esophagus muscularis mucosa
10
SK-N-DZ
10
SK-N-SH
10
angular gyrus
10
choroid plexus epithelial cell
10
pituitary stalk
9
cingulate gyrus
9
skeletal muscle fiber
9
stomach smooth muscle
8
SK-N-MC
8
globus pallidus
8
midbrain
7
BE(2)-C
7
LHCN-M2
7
amygdala
7
gastroesophageal sphincter
7
hypothalamus
7
nucleus accumbens
7
type I muscle cell
7
type II muscle cell
6
Brodmann (1909) area 46
6
Daoy
6
anterior cingulate cortex
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cerebellum (Hemisphere)
6
medulla oblongata
6
middle frontal gyrus
6
pons
6
skeletal muscle cell
5
cardiac fibroblast
5
A172
5
A673
5
M059J
5
SJCRH30
5
cerebellar cortex
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
myotube
4
H54
4
U-87 MG
4
brain pericyte
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
inferior parietal cortex
4
medulloblastoma
4
rectum smooth muscle tissue
3
dorsolateral prefrontal cortex
3
prefrontal cortex
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
forelimb muscle
2
hippocampal neuron
2
middle frontal area 46
2
pituitary gland
2
respiratory system smooth muscle
2
skeletal muscle
2
somatic muscle myotube
1
BE2C
1
Brodmann (1909) area 9
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Glioblastoma
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
cardiac fibroblast
1
cerebellar hemisphere
1
claustrum of brain
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
entorhinal cortex
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
frontal pole
1
hindlimb muscle
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
mid-frontal lobe
1
myelencephalon
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
raphe nuclei
1
rectal smooth muscle tissue
1
red nucleus
1
septal nuclear complex
1
smooth muscle tissue
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
1
undifferentiated ESC (H9 cell line)
Organ
1
brain
0
musculature of body
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
organ_slims!
blood vessel
Showing 1 of 1 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP