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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
binding sites
1
candidate regulatory elements
1
chromatin state
1
histone modifications
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
DNase-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
cell line
1
primary cell
Biosample term
3
cardiac fibroblast
2
Ammon's horn
2
brain
2
brain pericyte
2
caudate nucleus
2
choroid plexus epithelial cell
2
frontal cortex
2
globus pallidus
2
medulla oblongata
2
midbrain
2
pons
2
putamen
1
A172
1
BE(2)-C
1
Daoy
1
Glioblastoma
1
M059J
1
SK-N-DZ
1
SK-N-MC
1
U-87 MG
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
cerebellar cortex
1
cerebellum
1
fibroblast of villous mesenchyme
1
hippocampal neuron
1
inferior parietal cortex
1
middle frontal gyrus
1
placenta
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
prefrontal cortex
Organ
1
brain
1
embryo
1
extraembryonic component
1
placenta
Date released
1
June, 2020
1
November, 2021
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
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Download
FileSet
DSR983RIG
released
Annotation file set
: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR420CEV
released
Annotation file set
: Accessible chromatin annotation for Neural BE(2)-C from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP