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Citing CMDGA
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Annotation type
4
candidate regulatory elements
2
accessible chromatin
2
binding sites
2
chromatin state
2
target gene predictions
1
histone modifications
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
DNase-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
1
bronchial epithelial cell
1
club cell
Organ
134
epithelium
56
connective tissue
55
eye
54
pancreas
47
kidney
42
brain
31
vasculature
23
blood vessel
20
heart
20
limb
20
liver
19
musculature of body
14
bone element
12
blood
12
bodily fluid
11
artery
10
embryo
10
intestine
9
lung
8
lymph node
8
skeleton
8
skin of body
7
adipose tissue
7
large intestine
6
extraembryonic component
5
prostate gland
4
gonad
4
mammary gland
4
ureter
3
nerve
3
penis
3
stomach
2
bronchus
2
esophagus
2
lymphatic vessel
2
lymphoid tissue
2
placenta
2
spinal cord
2
spleen
2
testis
2
uterus
2
vein
1
adrenal gland
1
bone marrow
1
breast
1
mouth
1
nose
1
ovary
1
small intestine
1
thymus
1
thyroid gland
1
tongue
1
trachea
1
urinary bladder
Date released
1
April, 2020
1
June, 2020
November, 2021
Software used
1
macs
Lab
1
AMP-T2D consortium
1
Xin Sun, UCSD
Project
1
AMP
1
LungMap
RFA
1
AMP
1
LungMap2
month_released!
November, 2021
Showing 2 of 2 results
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Download
FileSet
DSR848VTY
released
Annotation file set
: ATAC-seq peaks in club cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR613FQC
released
Annotation file set
: Accessible chromatin annotation for Lung Bronchial epithelial cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP