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Citing CMDGA
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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
31
adipose tissue
30
fibroblast
26
adipocyte
22
pericyte cell
21
subcutaneous adipose tissue
18
mesenchymal stem cell
18
omental fat pad
16
fibroblast of cardiac tissue
15
foreskin fibroblast
14
fibroblast of lung
14
osteoblast
11
fibroblast of dermis
11
skin fibroblast
10
hepatic stellate cell
10
pancreatic stellate cell
7
mesangial cell
6
GM23248
6
chondrocyte
6
fibroblast of mammary gland
6
fibroblast of pulmonary artery
6
fibroblast of villous mesenchyme
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
4
HT1080
4
adult endothelial progenitor cell
4
bone tissue
4
brain pericyte
4
cardiac fibroblast
4
fibroblast of gingiva
4
stromal cell of bone marrow
4
visceral abdominal adipose tissue
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pancreatic quiescent stellate cell
3
preadipocyte
2
articular chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
pulmonary interstitial fibroblast
2
stromal cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose tissue derived mesenchymal stem cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
columnar chondrocyte
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
white adipose cell
1
white adipose tissue
Organ
1
connective tissue
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_type!
binding sites
Showing 1 of 1 results
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Download
FileSet
DSR980SZR
released
Annotation file set
: Genetic variants with deltaSVM predictions in preadipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP