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Schema
Citing CMDGA
Clear Filters
Annotation type
31
candidate regulatory elements
28
target gene predictions
26
accessible chromatin
18
gene expression
15
eQTL
13
histone modifications
binding sites
6
Fine-mapped variants
6
chromatin state
5
variant allelic effects
2
differential activity
2
pQTL
Annotation Category
6
cis-regulatory elements
Annotation type Category
6
ChIP-seq
Available data
bed bed9
6
bed bed3+
1
bigBed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
4
in vitro differentiated cells
2
tissue
primary cell
Biosample term
4
adipocyte
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
Organ
6
brain
6
connective tissue
5
heart
4
intestine
4
pancreas
3
large intestine
3
liver
3
musculature of body
2
adipose tissue
2
blood
2
bodily fluid
1
embryo
1
small intestine
1
stomach
Date released
6
August, 2017
Software used
6
chromhmm
Lab
5
Stephen Parker, UMich
1
AMP-T2D consortium
Project
6
AMP
RFA
6
AMP
annotation_type!
binding sites
biosample_type!
primary cell
files.file_type!
bed bed9
Showing 6 of 6 results
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FileSet
TSTSR644651
released
Annotation file set
: ChromHMM 13-state model for hASC-t4
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR798156
released
Annotation file set
: ChromHMM 13-state model for hASC-t3
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR104634
released
Annotation file set
: ChromHMM 13-state model for hASC-t2
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR863340
released
Annotation file set
: ChromHMM 13-state model for hASC-t1
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR804392
released
Annotation file set
: ChromHMM 13-state model for Adipose
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
TSTSR033945
released
Annotation file set
: ChromHMM 18-state model for Adipose Nuclei
Lab:
AMP-T2D consortium
Project:
AMP