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Schema
Citing CMDGA
Clear Filters
Annotation type
31
candidate regulatory elements
28
target gene predictions
26
accessible chromatin
21
chromatin state
18
gene expression
15
eQTL
13
histone modifications
binding sites
6
Fine-mapped variants
5
variant allelic effects
2
differential activity
2
pQTL
Annotation Category
5
Genetic variant effects
Annotation type Category
4
ATAC-seq
1
DNase-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
primary cell
3
tissue
2
in vitro differentiated cells
Biosample term
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Preadipose SGBS cell line (adipocyte)
1
adipose tissue
1
subcutaneous adipose tissue
Organ
10
brain
10
heart
10
kidney
8
limb
6
blood vessel
6
vasculature
5
connective tissue
4
artery
4
musculature of body
4
pancreas
3
adipose tissue
3
ureter
2
epithelium
2
nerve
1
eye
Date released
5
May, 2020
Software used
5
deltasvm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_type!
binding sites
biosample_type!
primary cell
Showing 5 of 5 results
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FileSet
DSR980SZR
released
Annotation file set
: Genetic variants with deltaSVM predictions in preadipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR537CNJ
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose omental fat pad DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802UOO
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose white tissue ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR088HBN
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose subcutaneous ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR125CCG
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP