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Schema
Citing CMDGA
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Annotation type
5
gene expression
4
eQTL
2
candidate regulatory elements
1
chromatin state
1
differential activity
1
variant allelic effects
Annotation Category
4
Genetic variant effects
Annotation type Category
4
RNA-seq
1
RNA microarray
Available data
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
GRCh38
1
hg18
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
4
subcutaneous adipose tissue
3
adipose tissue
2
cartilage tissue
1
mesenchymal stem cell
1
omental fat pad
Organ
4
adipose tissue
4
connective tissue
Life stage
4
adult
Date released
3
August, 2021
1
February, 2021
Software used
1
epacts
1
fast-lmm
1
fastqtl
1
mach2qtl
1
matrix-eQTL
Lab
3
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
4
AMP
RFA
4
AMP
assembly!
GRCh38
Showing 4 of 4 results
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FileSet
DSR513VNX
released
Annotation file set
: eQTL annotation of subcutaneous adipose tissue from PMID:29632379
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR397GGI
released
Annotation file set
: eQTLS in different tissues: subcutaneous fat (609 samples)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR669QFK
released
Annotation file set
: eQTLs from RNA microarray samples from 770 males who are part of the METSIM study of subcutaneous adipose tissue for GSE70353
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR965YTD
released
Annotation file set
: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Lab:
Karen Mohlke, UNC
Project:
AMP