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Schema
Citing CMDGA
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Annotation type
2
accessible chromatin
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
6
bed bed3+
2
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
14
fibroblast
10
pericyte cell
4
pancreatic stellate cell
3
cardiac fibroblast
3
osteoblast
2
adipocyte
2
extracellular matrix secreting cell
2
fibroblast of cardiac tissue
2
hepatic stellate cell
2
mesangial cell
2
omental fat pad
2
subcutaneous adipose tissue
1
SGBS preadipocytes
1
adipose tissue
1
brain pericyte
1
luteal cell
1
mesenchymal stem cell
1
skin fibroblast
1
stromal cell
Organ
2
connective tissue
Date released
1
November, 2021
1
October, 2019
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
Showing 2 of 2 results
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Download
FileSet
DSR987PCG
released
Annotation file set
: Accessible chromatin annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR645XXX
released
Annotation file set
: Adipocyte accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP