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Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
6
chromatin state
6
target gene predictions
4
candidate regulatory elements
2
gene expression
1
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
snATAC-seq
Available data
5
bed bed3+
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
primary cell
Biosample term
8
adipose tissue
7
foreskin fibroblast
6
fibroblast
6
fibroblast of lung
5
adipocyte
5
omental fat pad
5
subcutaneous abdominal adipose tissue
4
fibroblast of dermis
4
mesenchymal stem cell
3
cardiac fibroblast
3
fibroblast of cardiac tissue
3
subcutaneous adipose tissue
2
cardiac fibroblast
2
GM23248
2
HT1080
2
brain pericyte
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
hepatic stellate cell
2
osteoblast
2
skin fibroblast
2
stromal cell of bone marrow
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Preadipose SGBS cell line (adipocyte)
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
fibroblast of skin of abdomen
1
pericyte cell
Organ
5
connective tissue
Life stage
2
adult
2
unknown
Date released
2
February, 2021
2
September, 2022
1
February, 2024
Software used
2
encode-ccres
2
r
1
deltasvm
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR611GAA
released
Annotation file set
: Candidate regulatory elements for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR854ZLT
released
Annotation file set
: Candidate regulatory elements for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR810TFD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR462QHF
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR476AJZ
released
Annotation file set
: Variant allelic effects annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP