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Schema
Citing CMDGA
Clear Filters
Annotation type
6
accessible chromatin
6
chromatin state
6
target gene predictions
4
candidate regulatory elements
2
gene expression
1
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
6
Target gene links
1
Genetic variant effects
Annotation type Category
6
DNase-seq
4
ATAC-seq
4
H3K27ac ChIP-Seq
2
ChIP-seq
1
snATAC-seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
6
in vitro differentiated cells
1
primary cell
Biosample term
10
fibroblast
10
pericyte cell
9
adipose tissue
7
adipocyte
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
mesenchymal stem cell
3
foreskin fibroblast
3
skin fibroblast
2
cardiac fibroblast
2
hepatic stellate cell
2
omental fat pad
2
osteoblast
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
GM23248
1
HT1080
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
adult endothelial progenitor cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
beige adipocyte
1
brain pericyte
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
luteal cell
1
pancreatic stellate cell
1
stromal cell
1
stromal cell of bone marrow
1
subcutaneous adipose tissue
1
white adipose cell
1
white adipose tissue
Organ
7
connective tissue
Life stage
1
adult
1
unknown
Date released
4
May, 2021
2
September, 2022
1
February, 2024
Software used
4
abc
2
r
1
deltasvm
Lab
4
Jesse Engreitz, Stanford University
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
7
AMP
RFA
7
AMP
Showing 7 of 7 results
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Download
FileSet
DSR339QKV
released
Annotation file set
: Target gene predictions for BSS00039 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR619LYX
released
Annotation file set
: Target gene predictions for BSS00038 adipocyte from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR039HOA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d14 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR164LWB
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d6 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR542JXE
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d2 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR941KCA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d0 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR476AJZ
released
Annotation file set
: Variant allelic effects annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP