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Schema
Citing CMDGA
Clear Filters
Annotation type
7
candidate regulatory elements
5
accessible chromatin
4
binding sites
4
target gene predictions
3
differential activity
2
chromatin state
2
gene expression
2
histone modifications
Annotation Category
5
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
DNase-seq
Available data
5
bed bed3+
4
bigWig
1
bigBed narrowPeak
File set status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
16
fibroblast
10
pericyte cell
6
adipocyte
5
chondrocyte
5
osteoblast
4
fibroblast of cardiac tissue
4
pancreatic stellate cell
3
cardiac fibroblast
3
hepatic stellate cell
3
mesenchymal stem cell
3
skin fibroblast
2
adipose tissue
2
brain pericyte
2
extracellular matrix secreting cell
2
mesangial cell
2
omental fat pad
2
subcutaneous adipose tissue
1
GM23248
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
luteal cell
1
preadipocyte
1
pulmonary interstitial fibroblast
1
stromal cell
Organ
5
connective tissue
4
pancreas
1
penis
1
skin of body
Life stage
1
adult
Date released
2
February, 2024
1
January, 2021
1
June, 2020
1
June, 2021
Software used
5
macs
Lab
4
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
4
AMP
1
T1D
RFA
4
AMP
1
T1D
Showing 5 of 5 results
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Download
FileSet
DSR242BFD
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Quiescent Stellate
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR972BOL
released
Annotation file set
: accessible chromatin annotation from scATAC-seq of Active Stellate
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR124PLH
released
Annotation file set
: Accessible chromatin annotation for Epidermis HFF from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR223BJV
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of activated_stellate
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR364QCE
released
Annotation file set
: pancreatic stellate cell accessible chromatin annotation from snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP