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Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
3
binding sites
2
candidate regulatory elements
2
gene expression
2
histone modifications
2
target gene predictions
1
chromatin state
Annotation Category
2
Gene expression levels
2
Target gene links
Annotation type Category
2
DNase-seq
2
RNA-seq
1
ATAC-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
2
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
11
adipose tissue
10
pericyte cell
8
adipocyte
5
mesangial cell
5
mesenchymal stem cell
5
subcutaneous adipose tissue
4
adult endothelial progenitor cell
4
bone tissue
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
omental fat pad
4
osteoblast
3
Adaptive / Maladaptive / Repairing Fibroblast
3
Fibroblast
3
Mesangial Cell
3
foreskin fibroblast
3
pancreatic stellate cell
3
skin fibroblast
2
hepatic stellate cell
2
visceral abdominal adipose tissue
1
GM23248
1
HT1080
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
activated pancreatic stellate cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
kidney interstitial fibroblast
1
luteal cell
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
stromal cell
1
stromal cell of bone marrow
1
white adipose cell
1
white adipose tissue
Organ
4
connective tissue
Life stage
2
unknown
1
adult
Date released
1
February, 2021
1
May, 2021
1
November, 2020
1
September, 2022
Software used
3
r
1
abc
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR608JCL
released
Annotation file set
: Target gene predictions for BSS01397 osteoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR703WRC
released
Annotation file set
: Gene expression annotation of osteoporosis cell from 4 cell lines for GSE120755 RNA-seq data
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR204TLG
released
Annotation file set
: Gene expression annotation of E-MTAB-6835 - RNA-seq of primary mesenchymal stem cells -derived osteoblasts (differentiated with BMP2) from 3 human donors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR069ZRF
released
Annotation file set
: enhancer-gene predicton of osteoblast-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP