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Schema
Citing CMDGA
Clear Filters
Annotation type
7
eQTL
6
candidate regulatory elements
6
gene expression
5
accessible chromatin
4
chromatin state
4
target gene predictions
3
Fine-mapped variants
1
binding sites
1
caQTL
1
differential activity
1
histone modifications
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
3
bed bed9
1
bed bed3+
1
bigBed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
3
GRCh38
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
1
tissue
Biosample term
6
adipocyte
6
adipose tissue
4
fibroblast of lung
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
mesenchymal stem cell
2
foreskin fibroblast
2
omental fat pad
2
skin fibroblast
1
GM23248
1
HT1080
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
hepatic stellate cell
1
osteoblast
1
pericyte cell
1
stromal cell of bone marrow
1
subcutaneous abdominal adipose tissue
1
subcutaneous adipose tissue
Organ
4
connective tissue
1
adipose tissue
Life stage
2
adult
1
embryonic
Date released
2
September, 2022
1
August, 2017
1
October, 2019
Software used
4
chromhmm
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR073XBJ
released
Annotation file set
: Chromatin states for BSS01261 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR625MZJ
released
Annotation file set
: Chromatin states for BSS01260 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR139NCZ
released
Annotation file set
: ChromHMM 15-state model for Mesenchymal Stem Cell from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR804392
released
Annotation file set
: ChromHMM 13-state model for Adipose
Lab:
Stephen Parker, UMich
Project:
AMP