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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
7
GM23248
5
fibroblast of cardiac tissue
4
HT1080
3
foreskin fibroblast
2
adipose tissue derived mesenchymal stem cell
2
chondrocyte
2
hepatic stellate cell
2
skin fibroblast
1
adipose-derived mesenchymal stem cell
1
brain pericyte
1
fibroblast
1
fibroblast of the conjunctiva
Disease term
3
fibrosarcoma
Organ
4
connective tissue
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
organ_slims!
blood
Showing 4 of 4 results
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Download
FileSet
DSR838AAN
released
Annotation file set
: Candidate regulatory elements for BSS00709 HT1080 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR810CKU
released
Annotation file set
: Target gene predictions for BSS00709 HT1080 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR488OIF
released
Annotation file set
: Chromatin states for BSS00709 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR542MAT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HT1080
Lab:
AMP-T2D consortium
Project:
AMP