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Citing CMDGA
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Annotation type
6
eQTL
5
gene expression
3
Fine-mapped variants
2
accessible chromatin
2
candidate regulatory elements
1
chromatin state
1
differential activity
1
variant allelic effects
Annotation Category
6
Gene expression levels
Annotation type Category
6
RNA-seq
Available data
6
tsv
File set status
6
released
Organism
6
Homo sapiens
Biosample type
6
tissue
Biosample term
6
subcutaneous adipose tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
mesangial cell
4
bone tissue
3
adipose tissue
3
adult endothelial progenitor cell
3
visceral abdominal adipose tissue
2
adipocyte
2
omental fat pad
2
osteoblast
1
activated pancreatic stellate cell
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
hepatic stellate cell
1
kidney interstitial fibroblast
1
mesenchymal stem cell
1
mesenchymal stem cell of adipose
1
pancreatic stellate cell
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
Disease term
1
coronary artery disease
Organ
6
adipose tissue
6
connective tissue
Life stage
6
adult
Date released
3
February, 2021
1
February, 2020
1
February, 2024
1
January, 2018
Software used
5
r
1
deseq2
Lab
5
AMP-T2D consortium
1
Karen Mohlke, UNC
Project
6
AMP
RFA
6
AMP
month_released!
March, 2023
Showing 6 of 6 results
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FileSet
DSR639EWK
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR306BCP
released
Annotation file set
: Gene expression annotation of subcutaneous adipose tissue for GSE135134
Lab:
Karen Mohlke, UNC
Project:
AMP
FileSet
DSR919NRD
released
Annotation file set
: Gene expression TPM of developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA_seq_Whole]
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR956BKR
released
Annotation file set
: Gene expression TPM of developmental origins define epigenomic differences between subcutaneous and visceral adipocytes of GSE110821 [RNA-Seq]
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR818ESF
released
Annotation file set
: Gene expression levels of adipose subcutaneous from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR545375
released
Annotation file set
: GTEx Analysis V8 (dbGaP Accession phs000424.v8.p2) and GTEx Analysis V7 (dbGaP Accession phs000424.v7.p2) TPM gene expression values from GTEx for key tissues - adipose subcutaneous
Lab:
AMP-T2D consortium
Project:
AMP