Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
4
target gene predictions
3
accessible chromatin
3
chromatin state
1
binding sites
1
caQTL
1
eQTL
1
gene expression
1
histone modifications
Annotation Category
7
cis-regulatory elements
Annotation type Category
5
DNase-seq
4
ChIP-seq
2
snATAC-seq
Available data
7
bed bed3+
1
bigWig
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
4
in vitro differentiated cells
3
primary cell
Biosample term
16
fibroblast
11
pericyte cell
10
adipocyte
9
adipose tissue
8
foreskin fibroblast
7
fibroblast of cardiac tissue
7
mesenchymal stem cell
7
omental fat pad
7
osteoblast
6
fibroblast of lung
5
chondrocyte
5
skin fibroblast
5
subcutaneous abdominal adipose tissue
4
fibroblast of dermis
4
hepatic stellate cell
4
pancreatic stellate cell
4
subcutaneous adipose tissue
3
cardiac fibroblast
3
GM23248
3
brain pericyte
3
cardiac fibroblast
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
2
HT1080
2
extracellular matrix secreting cell
2
fibroblast of gingiva
2
fibroblast of the aortic adventitia
2
mesangial cell
2
stromal cell of bone marrow
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of skin of abdomen
1
luteal cell
1
preadipocyte
1
pulmonary interstitial fibroblast
1
stromal cell
Organ
7
connective tissue
Life stage
2
adult
2
embryonic
1
unknown
Date released
2
February, 2021
2
September, 2022
1
February, 2024
1
June, 2020
1
May, 2022
Software used
3
macs
2
encode-ccres
2
r
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
RFA
6
AMP
1
AMP2
organ_slims!
musculature of body
Showing 7 of 7 results
table-tab-icon
matrix-icon
Download
FileSet
DSR902OPF
released
Annotation file set
: Candidate regulatory elements for BSS01261 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR329XEJ
released
Annotation file set
: Candidate regulatory elements for BSS01260 mesenchymal stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR707RQM
released
Annotation file set
: Accessible chromatin from snATAC-seq of mesenchymal stem cell from human skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR718ELE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR627LDJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR847RRB
released
Annotation file set
: Cell type chromatin broad peaks and bw of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR497YXK
released
Annotation file set
: Accessible chromatin annotation for Others Mesenchymal stem cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP