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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
1
bigWig
File set status
2
released
Genome assembly (visualization)
6
hg19
2
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
25
kidney
22
fibroblast
19
pericyte cell
11
right kidney
10
renal cortex interstitium
10
renal pelvis
9
left kidney
8
omental fat pad
7
adipose tissue
7
subcutaneous adipose tissue
6
fibroblast of cardiac tissue
4
osteoblast
4
skin fibroblast
3
cardiac fibroblast
3
adipocyte
3
fibroblast of dermis
3
fibroblast of lung
3
hepatic stellate cell
3
kidney tubule cell
3
left renal cortex interstitium
3
left renal pelvis
3
mesenchymal stem cell
3
right renal cortex interstitium
3
right renal pelvis
2
epithelial cell of proximal tubule
2
fat cell
2
fibroblast of the aortic adventitia
2
foreskin fibroblast
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
luteal cell
2
mesangial cell
2
pancreatic stellate cell
2
renal cortical epithelial cell
2
stromal cell
1
ACHN
1
Caki2
1
G401
1
GM23248
1
HEK293
1
HEK293T
1
HT1080
1
RCC 7860
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
brain pericyte
1
cortex of kidney
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
metanephros
1
parietal epithelial cell
1
renal cell carcinoma
1
stromal cell of bone marrow
1
ureteric bud
1
visceral abdominal adipose tissue
Organ
2
epithelium
2
kidney
0
connective tissue
Life stage
1
unknown
Date released
1
January, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR408VLN
released
Annotation file set
: Chromatin states for BSS00387 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR549KDR
released
Annotation file set
: Accessible chromatin annotation of kidney glomerular endothelial cell from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP