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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
accessible chromatin
1
binding sites
1
chromatin state
1
histone modifications
Annotation Category
2
Target gene links
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
14
large intestine
10
pericyte cell
8
adipose tissue
7
sigmoid colon
6
adipocyte
5
transverse colon
4
colon epithelial cell
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
mesenchymal stem cell
3
HCT116
3
foreskin fibroblast
3
skin fibroblast
2
HT-29
2
colonic mucosa
2
mucosa of rectum
2
muscle layer of colon
2
omental fat pad
2
osteoblast
1
GM23248
1
HCT-116 cell
1
HT1080
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
SW480
1
adult endothelial progenitor cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
beige adipocyte
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
hepatic stellate cell
1
luteal cell
1
pancreatic stellate cell
1
rectum smooth muscle tissue
1
stromal cell
1
stromal cell of bone marrow
1
white adipose cell
1
white adipose tissue
Disease term
1
colorectal adenocarcinoma
Organ
2
intestine
2
large intestine
0
connective tissue
Life stage
1
adult
Date released
1
May, 2021
1
September, 2022
Software used
1
abc
1
r
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR883VDG
released
Annotation file set
: Target gene predictions for BSS00708 HT-29 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR797VJC
released
Annotation file set
: enhancer-gene predicton of HT29 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP