Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
5
accessible chromatin
3
binding sites
2
candidate regulatory elements
2
gene expression
2
histone modifications
2
target gene predictions
1
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
3
DNase-seq
2
ATAC-seq
Available data
5
bed bed3+
3
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
3
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
16
fibroblast
10
pericyte cell
6
adipocyte
5
chondrocyte
5
osteoblast
4
fibroblast of cardiac tissue
4
pancreatic stellate cell
3
cardiac fibroblast
3
colon epithelial cell
3
hepatic stellate cell
3
mesenchymal stem cell
3
skin fibroblast
2
adipose tissue
2
brain pericyte
2
extracellular matrix secreting cell
2
mesangial cell
2
omental fat pad
2
subcutaneous adipose tissue
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM13976
1
GM13977
1
GM20000
1
GM23248
1
HCT-116 cell
1
HT-29
1
MM.1S
1
RKO
1
SGBS preadipocytes
1
SW480
1
adipose-derived mesenchymal stem cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin fibroblast
1
large intestine
1
luteal cell
1
preadipocyte
1
pulmonary interstitial fibroblast
1
sigmoid colon
1
stromal cell
1
transverse colon
Organ
5
connective tissue
0
large intestine
0
lymph node
Life stage
2
unknown
1
adult
Date released
2
June, 2020
2
November, 2020
1
February, 2021
Software used
5
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR906VQP
released
Annotation file set
: GSE120755 DNase-seq accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR010PUE
released
Annotation file set
: Accessible chromatin of E-MTAB-6834 - ATAC-seq of primary mesenchymal stem cell (MSC)-derived osteoblasts (differentiated with BMP2) from 4 human donors
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR383TPO
released
Annotation file set
: GSE120755 accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR028APK
released
Annotation file set
: Accessible chromatin annotation for Bone Osteobl from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR303JQK
released
Annotation file set
: Accessible chromatin annotation for Bone Osteoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP