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Schema
Citing CMDGA
Clear Filters
Annotation type
88
accessible chromatin
88
target gene predictions
80
candidate regulatory elements
50
gene expression
48
chromatin state
31
binding sites
26
histone modifications
20
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
snATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
1
fibroblast of the aortic adventitia
1
mesenchymal stem cell
Organ
3
blood vessel
3
vasculature
2
artery
2
connective tissue
2
epithelium
2
heart
2
musculature of body
1
liver
0
pituitary gland
Date released
1
February, 2023
1
October, 2022
Software used
2
rasqual
1
eigenmt
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
Showing 2 of 2 results
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FileSet
DSR077AGV
released
Annotation file set
: Chromatin accessibility QTLs in fibroblasts passing genome-wide multiple testing correction (5% FDR) of ATAC-seq in 35 human coronary artery patients
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP