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Citing CMDGA
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Annotation type
6
accessible chromatin
3
binding sites
3
target gene predictions
2
candidate regulatory elements
2
gene expression
2
histone modifications
1
chromatin state
Annotation Category
3
Target gene links
Annotation type Category
2
ATAC-seq
2
DNase-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
10
pericyte cell
10
pituitary stalk
8
adipose tissue
6
adipocyte
4
fibroblast
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
mesenchymal stem cell
3
foreskin fibroblast
3
skin fibroblast
2
omental fat pad
2
osteoblast
1
GM23248
1
HT1080
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
adult endothelial progenitor cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
beige adipocyte
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the aortic adventitia
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
hepatic stellate cell
1
luteal cell
1
pancreatic stellate cell
1
stromal cell
1
stromal cell of bone marrow
1
white adipose cell
1
white adipose tissue
Organ
3
connective tissue
1
gonad
1
ovary
0
pituitary gland
Life stage
1
unknown
Date released
1
May, 2021
1
November, 2021
1
September, 2022
Software used
2
abc
1
r
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Jesse Engreitz, Stanford University
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
Showing 3 of 3 results
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Download
FileSet
DSR608JCL
released
Annotation file set
: Target gene predictions for BSS01397 osteoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR246QUC
released
Annotation file set
: Target gene predictions of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR069ZRF
released
Annotation file set
: enhancer-gene predicton of osteoblast-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP