Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
chromatin state
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
32
adipose tissue
32
fibroblast
27
adipocyte
22
foreskin keratinocyte
22
pericyte cell
21
keratinocyte
21
subcutaneous adipose tissue
19
foreskin fibroblast
19
mesenchymal stem cell
18
omental fat pad
17
fibroblast of cardiac tissue
17
osteoblast
16
fibroblast of lung
12
fibroblast of dermis
12
skin fibroblast
11
hepatic stellate cell
10
dermis blood vessel endothelial cell
10
lower leg skin
10
pancreatic stellate cell
8
dermis lymphatic vessel endothelial cell
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
7
GM23248
7
chondrocyte
7
mesangial cell
6
iPS DF 4.7 Cell Line
6
skin of body
6
subcutaneous abdominal adipose tissue
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
RPMI7951
5
SK-MEL-5
5
cardiac fibroblast
5
cartilage tissue
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
5
iPS DF 19.11
4
HT1080
4
adult endothelial progenitor cell
4
bone tissue
4
brain pericyte
4
dermis microvascular lymphatic vessel endothelial cell
4
fibroblast of gingiva
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
4
preadipocyte
4
stromal cell of bone marrow
4
visceral abdominal adipose tissue
3
COLO829
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
epidermal melanocyte
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
3
suprapubic skin
2
adipose tissue derived mesenchymal stem cell
2
basal cell of epidermis
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
granular cell of epidermis
2
luteal cell
2
skin of forearm
2
skin of prepuce of penis
2
stromal cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
BJ
1
HGPS cell
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 4.7
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
white adipose cell
1
white adipose tissue
Organ
5
skin of body
0
connective tissue
Life stage
3
newborn
1
postnatal
Date released
3
September, 2022
1
February, 2021
1
May, 2021
Software used
2
r
1
abc
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR895SKI
released
Annotation file set
: Candidate regulatory elements for BSS00731 iPS DF 19.11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR985UCV
released
Annotation file set
: Target gene predictions for BSS00731 iPS DF 19.11 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR241URV
released
Annotation file set
: Chromatin states for BSS00731 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR584ZJC
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE iPS DF 19.11
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR544HLF
released
Annotation file set
: enhancer-gene predicton of iPS_DF_19.11_Cell_Line-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP