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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
candidate regulatory elements
2
target gene predictions
1
chromatin state
1
eQTL
1
gene expression
Annotation Category
4
cis-regulatory elements
2
Target gene links
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
5
ChIP-seq
5
DNase-seq
2
RNA-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
1
bed bed9
1
tsv
File set status
8
released
Genome assembly (visualization)
6
hg19
2
GRCh38
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
64
HeLa-S3
29
adipose tissue
19
adipocyte
19
subcutaneous adipose tissue
16
fibroblast of lung
16
omental fat pad
14
foreskin fibroblast
14
mesenchymal stem cell
13
fibroblast
13
pericyte cell
12
fibroblast of dermis
10
fibroblast of cardiac tissue
8
osteoblast
8
uterus
7
skin fibroblast
6
pancreatic stellate cell
6
subcutaneous abdominal adipose tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
cardiac fibroblast
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of the aortic adventitia
5
fibroblast of villous mesenchyme
5
hepatic stellate cell
5
mesangial cell
4
GM23248
4
HT1080
4
adult endothelial progenitor cell
4
bone tissue
4
cartilage tissue
4
fibroblast of gingiva
4
fibroblast of peridontal ligament
4
fibroblast of the conjunctiva
4
stromal cell of bone marrow
4
visceral abdominal adipose tissue
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pancreatic quiescent stellate cell
2
cardiac fibroblast
2
articular chondrocyte
2
brain pericyte
2
extracellular matrix secreting cell
2
fat cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Ishikawa
1
Preadipose SGBS cell line (adipocyte)
1
activated pancreatic stellate cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cervix - ectocervix
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
luteal cell
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
stromal cell
1
uterine smooth muscle cell
1
white adipose cell
1
white adipose tissue
Organ
8
uterus
0
connective tissue
Life stage
6
adult
Date released
3
September, 2022
2
February, 2021
1
January, 2022
1
March, 2024
1
May, 2021
Software used
3
r
2
encode-ccres
1
abc
1
chromhmm
macs
1
qTLtools
Lab
7
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
8
AMP
RFA
8
AMP
software_used.software.name!
macs
Showing 8 of 8 results
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Download
FileSet
DSR606YST
released
Annotation file set
: Gene expression summary from GTEx V8 - Gene TPMs for Uterus.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR903VBR
released
Annotation file set
: Candidate regulatory elements for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR090SSF
released
Annotation file set
: Target gene predictions for BSS01884 uterus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR590GOS
released
Annotation file set
: Chromatin states for BSS01884 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR572QKZ
released
Annotation file set
: uterus eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR196WYN
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE uterus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR703DFT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE uterus
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR254PVY
released
Annotation file set
: enhancer-gene predicton of uterus-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP