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Citing CMDGA
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Annotation type
2
target gene predictions
Annotation Category
2
Target gene links
Annotation type Category
2
pCHi-C
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
stem cell
1
tissue
Biosample term
1
adipose tissue
1
mesenchymal stem cell
Organ
3
heart
2
brain
2
connective tissue
2
intestine
1
adipose tissue
1
adrenal gland
1
blood vessel
1
embryo
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vasculature
Date released
2
March, 2020
Software used
126
macs
102
r
43
chromhmm
31
abc
27
encode-ccres
16
deltasvm
9
qTLtools
8
deseq2
5
fastqtl
4
chicago
4
peer
2
deeptools
2
gtex_eqtl:V8
2
gtex_finemapping_eQTL:caveman
2
gtex_finemapping_eQTL:caviar
2
gtex_finemapping_eQTL:dapg
2
mach2qtl
2
nospecificsoft_customcode
2
rasqual
2
samtools
2
umitools
1
cicero
1
eigenmt
1
emmax
1
epacts
1
fast-lmm
1
matrix-eQTL
1
probabel
1
seurat
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
relevant_life_stage!
unknown
Showing 2 of 2 results
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Download
FileSet
DSR333DPA
released
Annotation file set
: A target gene prediction annotation in Human Mesenchymal Stem Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR788UJU
released
Annotation file set
: A target gene prediction annotation in Human Fat of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP