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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
DNase-seq
3
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
4
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
primary cell
4
in vitro differentiated cells
Biosample term
45
H1-hESC
15
H9
12
chorionic villus
9
trophoblast
8
endodermal cell
7
mesodermal cell
6
HUES8
5
CyT49
5
H7-hESC
5
HUES6
4
H4
4
HUES64
4
ectodermal cell
4
trophoblast cell
3
ELF-1
3
HUES48
3
UCSF-4
3
embryonic facial prominence
3
hESC H9
2
ES-I3
2
cardiac mesoderm primordium
2
first pancreatic bud
1
H1
1
H7
1
cardiogenic mesoderm
1
embryonic fibroblast
1
morula
1
primordial germ cell
Organ
4
embryo
4
extraembryonic component
Life stage
3
embryonic
Date released
2
September, 2022
1
February, 2021
1
May, 2021
Software used
2
r
1
abc
1
encode-ccres
Lab
3
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
4
AMP
RFA
4
AMP
biosample_type!
primary cell
Showing 4 of 4 results
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Download
FileSet
DSR843UFV
released
Annotation file set
: Candidate regulatory elements for BSS01857 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR046UMD
released
Annotation file set
: Target gene predictions for BSS01857 trophoblast cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR287MFH
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE trophoblast cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR250DDG
released
Annotation file set
: enhancer-gene predicton of H1_BMP4_Derived_Trophoblast_Cultured_Cells-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP