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Annotation type
8
target gene predictions
2
binding sites
2
candidate regulatory elements
2
chromatin state
1
accessible chromatin
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
9
trophoblast cell
8
chorionic villus
7
H9
7
K562
4
endodermal cell
4
mesodermal cell
4
peripheral blood mononuclear cell
4
trophoblast
2
CMK
2
DOHH2
2
ELF-1
2
GM06990
2
GM12875
2
GM12878
2
H4
2
HAP-1
2
HL-60
2
HUES48
2
HUES6
2
HUES64
2
KBM-7
2
NAMALWA
2
NAMALWA cell
2
NB4
2
OCI-LY7
2
RPMI8226
2
SU-DHL-6
2
UCSF-4
2
ectodermal cell
1
ES-I3
1
GM12873
1
GM12874
1
GM12891
1
GM12892
1
GM19238
1
GM19239
1
GM19240
1
H1
1
H1-hESC
1
H7
1
H7-hESC
1
Karpas-422
1
cardiac mesoderm primordium
1
embryonic facial prominence
Organ
2
blood
2
bodily fluid
0
embryo
Life stage
2
adult
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
organ_slims!
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Showing 2 of 2 results
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Download
FileSet
DSR518KFU
released
Annotation file set
: Candidate regulatory elements for BSS00439 GM12878 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR589MOX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM12878
Lab:
AMP-T2D consortium
Project:
AMP