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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
binding sites
1
chromatin state
1
target gene predictions
Annotation Category
4
cis-regulatory elements
1
Target gene links
Annotation type Category
5
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
53
H1-hESC
22
trophoblast cell
16
H9
16
chorionic villus
10
endodermal cell
10
trophoblast
8
mesodermal cell
5
CyT49
5
H7-hESC
5
HUES6
5
HUES64
5
HUES8
5
ectodermal cell
4
ELF-1
4
H4
4
HUES48
4
UCSF-4
3
ES-I3
3
cardiac mesoderm primordium
3
embryonic facial prominence
2
first pancreatic bud
2
hESC H9
2
primordial germ cell
1
H1
1
H7
1
cardiogenic mesoderm
1
embryonic fibroblast
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
trophoblast giant cell
Organ
5
embryo
Life stage
4
embryonic
Date released
3
September, 2022
2
February, 2021
June, 2020
Software used
2
r
1
chromhmm
1
encode-ccres
1
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
organ_slims!
prostate gland
month_released!
June, 2020
Showing 5 of 5 results
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Download
FileSet
DSR791INS
released
Annotation file set
: Candidate regulatory elements for BSS00716 HUES6 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR219QQF
released
Annotation file set
: Target gene predictions for BSS00716 HUES6 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR494MHC
released
Annotation file set
: Chromatin states for BSS00716 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR446SRB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HUES6
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR843DDZ
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_HUES6 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP