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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
primary cell
1
tissue
Biosample term
54
H1-hESC
23
trophoblast cell
16
H9
16
chorionic villus
11
trophoblast
10
endodermal cell
8
mesodermal cell
6
H7-hESC
6
HUES6
6
HUES8
5
CyT49
5
H4
5
HUES64
5
ectodermal cell
4
ELF-1
4
HUES48
4
UCSF-4
4
embryonic facial prominence
3
ES-I3
3
cardiac mesoderm primordium
3
hESC H9
3
primordial germ cell
2
first pancreatic bud
1
H1
1
H7
1
cardiogenic mesoderm
1
embryonic fibroblast
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
trophoblast giant cell
Organ
2
embryo
1
extraembryonic component
1
placenta
Date released
1
February, 2021
1
November, 2021
Software used
2
macs
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Project
1
AMP
1
ENCODE
RFA
1
AMP
1
ENCODE3
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Download
FileSet
DSR983RIG
released
Annotation file set
: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR873LHN
released
Annotation file set
: Histone modifications annotation for Others Morula from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP