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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
accessible chromatin
1
candidate regulatory elements
1
chromatin state
1
histone modifications
Annotation Category
4
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
1
bed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
6
cell line
Biosample term
54
H1-hESC
23
trophoblast cell
21
coronary artery
20
endothelial cell of umbilical vein
19
tibial artery
16
H9
16
ascending aorta
16
chorionic villus
16
endothelial cell of hepatic sinusoid
13
aorta
11
thoracic aorta
11
trophoblast
10
dermis blood vessel endothelial cell
10
endodermal cell
8
fibroblast of pulmonary artery
8
mesodermal cell
8
urinary bladder
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
6
H7-hESC
6
HUES6
6
HUES8
5
Afferent / Efferent Arteriole Endothelial Cell
5
CyT49
5
Degenerative Peritubular Capillary Endothelial Cell
5
Glomerular Capillary Endothelial Cell
5
H4
5
HUES64
5
Peritubular Capillary Endothelial Cell
5
brain microvascular endothelial cell
5
ectodermal cell
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
4
ELF-1
4
HUES48
4
UCSF-4
4
aortic endothelial cell
4
embryonic facial prominence
4
pancreatic endothelial cell
3
ES-I3
3
cardiac mesoderm primordium
3
hESC H9
3
primordial germ cell
2
capillary endothelial cell
2
endothelial cell of coronary artery
2
first pancreatic bud
2
vein endothelial cell
1
brain microvascular endothelial cell
1
H1
1
H7
1
abdominal aorta artery
1
aorta wall
1
aortic smooth muscle cell
1
bladder
1
bladder (urinary bladder)
1
cardiogenic mesoderm
1
circle of Willis
1
embryonic fibroblast
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
trophoblast giant cell
1
whole blood
Organ
6
embryo
0
blood vessel
0
urinary bladder
Life stage
3
embryonic
Date released
3
September, 2022
1
February, 2021
1
June, 2020
1
May, 2021
Software used
2
macs
2
r
1
abc
1
chromhmm
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
Showing 6 of 6 results
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Download
FileSet
DSR245YQC
released
Annotation file set
: Candidate regulatory elements for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR472ULW
released
Annotation file set
: Target gene predictions for BSS00483 H7-hESC from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR803QHX
released
Annotation file set
: Chromatin states for BSS00483 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR157MZQ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR486DHW
released
Annotation file set
: enhancer-gene predicton of H7 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR227UQF
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC H7 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP