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Schema
Citing CMDGA
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Annotation type
39
target gene predictions
8
gene expression
2
binding sites
2
chromatin state
1
accessible chromatin
1
candidate regulatory elements
1
histone modifications
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
cell line
1
stem cell
Biosample term
5
endothelial cell of umbilical vein
5
trophoblast cell
4
chorionic villus
4
foreskin keratinocyte
3
keratinocyte
3
mammary gland epithelial cell
2
H1-hESC
2
breast epithelium
2
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
endodermal cell
2
epithelial cell of prostate
2
esophagus squamous epithelium
2
hepatocyte
2
kidney tubule cell
2
myoepithelial cell of mammary gland
2
trophoblast
1
ELF-1
1
ES-I3
1
H4
1
H7-hESC
1
H9
1
HUES48
1
HUES6
1
HUES64
1
UCSF-4
1
brain microvascular endothelial cell
1
cardiac mesoderm primordium
1
choroid plexus epithelial cell
1
colon epithelial cell
1
ectodermal cell
1
embryonic facial prominence
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
mesodermal cell
1
non-pigmented ciliary epithelial cell
1
pulmonary artery endothelial cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
Organ
2
embryo
0
epithelium
Life stage
2
embryonic
Date released
1
August, 2017
1
September, 2022
Software used
2
chromhmm
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR002BRL
released
Annotation file set
: Chromatin states for BSS00478 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR642714
released
Annotation file set
: ChromHMM 13-state model for H1
Lab:
Stephen Parker, UMich
Project:
AMP