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Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
11
foreskin keratinocyte
9
trophoblast cell
8
chorionic villus
7
H9
6
dermis blood vessel endothelial cell
6
endothelial cell of umbilical vein
6
esophagus squamous epithelium
5
breast epithelium
4
bronchial epithelial cell
4
endodermal cell
4
epithelial cell of prostate
4
mesodermal cell
4
myoepithelial cell of mammary gland
4
trophoblast
3
hepatocyte
3
keratinocyte
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
mammary gland epithelial cell
2
ELF-1
2
H4
2
HUES48
2
HUES6
2
HUES64
2
UCSF-4
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
ectodermal cell
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
iris pigment epithelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
1
ES-I3
1
H1
1
H1-hESC
1
H7
1
H7-hESC
1
amniotic epithelial cell
1
cardiac mesoderm primordium
1
colon epithelial cell
1
embryonic facial prominence
1
epidermal melanocyte
1
epithelial cell of amnion
1
kidney capillary endothelial cell
1
luminal epithelial cell of mammary gland
Organ
2
embryo
0
epithelium
Life stage
2
embryonic
Date released
1
February, 2021
1
September, 2022
Software used
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR791INS
released
Annotation file set
: Candidate regulatory elements for BSS00716 HUES6 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR446SRB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE HUES6
Lab:
AMP-T2D consortium
Project:
AMP