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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
54
H1-hESC
23
trophoblast cell
22
foreskin keratinocyte
21
keratinocyte
19
foreskin fibroblast
16
H9
16
chorionic villus
12
fibroblast of dermis
12
skin fibroblast
11
trophoblast
10
dermis blood vessel endothelial cell
10
endodermal cell
10
lower leg skin
8
dermis lymphatic vessel endothelial cell
8
mesodermal cell
7
GM23248
6
H7-hESC
6
HUES6
6
HUES8
6
iPS DF 4.7 Cell Line
6
skin of body
5
CyT49
5
H4
5
HUES64
5
RPMI7951
5
SK-MEL-5
5
ectodermal cell
5
iPS DF 19.11
4
ELF-1
4
HUES48
4
UCSF-4
4
dermis microvascular lymphatic vessel endothelial cell
4
embryonic facial prominence
4
iPS DF 19.7
4
iPS DF 6.9
4
iPS-11a
4
iPS-15b
4
iPS-18a
4
iPS-18c
4
iPS-20b
3
COLO829
3
ES-I3
3
cardiac mesoderm primordium
3
epidermal melanocyte
3
hESC H9
3
primordial germ cell
3
suprapubic skin
2
basal cell of epidermis
2
first pancreatic bud
2
granular cell of epidermis
2
skin of forearm
2
skin of prepuce of penis
1
BJ
1
H1
1
H7
1
HGPS cell
1
cardiogenic mesoderm
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
iPS DF 4.7
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
trophoblast giant cell
Organ
3
embryo
0
skin of body
Life stage
3
embryonic
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
Showing 3 of 3 results
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Download
FileSet
DSR289IIV
released
Annotation file set
: Candidate regulatory elements for BSS00169 cardiac mesoderm primordium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR890RKI
released
Annotation file set
: Target gene predictions for BSS00169 cardiac mesoderm primordium from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR372DTL
released
Annotation file set
: Chromatin states for BSS00169 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP