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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
1
variant allelic effects
0
differential activity
Annotation Category
1
Target gene links
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
7
endothelial cell
7
pancreatic delta cell
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic ductal cell
5
keratinocyte
4
EndoC_BH1
4
colon epithelial cell
4
endothelial cell of umbilical vein
4
foreskin keratinocyte
4
hepatocyte
4
mammary gland epithelial cell
3
breast epithelium
3
epithelial cell of prostate
3
luminal epithelial cell of mammary gland
3
pancreatic A cell
3
pancreatic alpha+beta cell
3
pancreatic cycling alpha cell
3
pancreatic endothelial cell
3
pancreatic gamma+epsilon cell
3
type B pancreatic cell
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Afferent / Efferent Arteriole Endothelial Cell
2
Connecting Tubule Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Lymphatic Endothelial Cell
2
Medullary Thick Ascending Limb Cell
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Transitional Principal-Intercalated Cell
2
bronchial epithelial cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
esophagus squamous epithelium
2
kidney tubule cell
2
myoepithelial cell of mammary gland
2
type II pneumocyte
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
cardiac endothelial cell
1
choroid plexus epithelial cell
1
club cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enterochromaffin-like cell
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
foveolar cell of stomach
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granular cell of epidermis
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
mesothelial cell
1
myoepithelial cell
1
non keratinizing barrier epithelial cell
1
non-pigmented ciliary epithelial cell
1
pancreatic polypeptide-secreting cell
1
paneth cell
1
parietal cell
1
peptic cell
1
pulmonary artery endothelial cell
1
renal cortical epithelial cell
1
respiratory goblet cell
1
retinal pigment epithelial cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
thyroid follicular cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
Organ
1
epithelium
1
stomach
Date released
1
November, 2021
Software used
1
abc
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
biosample_term_name!
enterocyte of epithelium of small intestine
Showing 1 of 1 results
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Download
FileSet
DSR283LYA
released
Annotation file set
: Target gene predictions of Parietal Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE