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Schema
Citing CMDGA
Clear Filters
Annotation type
13
gene expression
7
accessible chromatin
4
histone modifications
3
candidate regulatory elements
3
target gene predictions
2
chromatin state
2
variant allelic effects
1
binding sites
Annotation Category
7
cis-regulatory elements
Annotation type Category
5
ATAC-seq
2
DNase-seq
Available data
7
bed bed3+
6
bigWig
File set status
7
released
Genome assembly (visualization)
7
hg19
6
GRCh38
Organism
7
Homo sapiens
Biosample type
7
primary cell
Biosample term
20
pigmented layer of retina
8
EndoC_BH1
8
retinal pigment epithelial cell
7
hepatocyte
6
endothelial cell
6
pancreatic beta cell
6
pancreatic ductal cell
5
pancreatic alpha cell
4
endothelial cell of hepatic sinusoid
4
pancreatic acinar cell
4
pancreatic delta cell
3
glomerular visceral epithelial cell
2
aortic endothelial cell
2
capillary endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
glomerular endothelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
pancreatic polypeptide-secreting cell
2
renal cortical epithelial cell
1
brain microvascular endothelial cell
1
breast epithelium
1
bronchial epithelial cell
1
club cell
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell of lymphatic vessel
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
esophagus squamous epithelium
1
foreskin keratinocyte
1
glomerular epithelium
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
mammary epithelial cell
1
mammary gland epithelial cell
1
neuroendocrine cell
1
non-pigmented ciliary epithelial cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic endothelial cell
1
pulmonary artery endothelial cell
1
renal cortex tubule
1
renal intercalated cell
1
renal principal cell
1
tracheal epithelial cell
1
type B pancreatic cell
1
type I pneumocyte
1
type II pneumocyte
1
urothelial cell
Organ
7
epithelium
7
liver
Life stage
5
adult
Date released
5
February, 2024
1
January, 2020
1
June, 2020
Software used
7
macs
Lab
5
Ines Cebola, Imperial College London
2
AMP-T2D consortium
Project
7
AMP
ENCODE
RFA
5
AMP2
2
AMP
award.project!
ENCODE
Showing 7 of 7 results
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FileSet
DSR614AYG
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin, 320µM palmitic acid and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR961YSK
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR909IMA
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin and 320µM palmitic acid (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR862SUJ
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 10nM insulin (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR683ANQ
released
Annotation file set
: Accessible chromatin of primary hepatocytes in basal media with 0.1nM insulin (18 hours). Monolayer culture, day 3.
Lab:
Ines Cebola, Imperial College London
Project:
AMP
FileSet
DSR956IPN
released
Annotation file set
: Accessible chromatin annotation for Liver Hepatocytes from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR934SGC
released
Annotation file set
: Accessible chromatin annotation of liver hepatocyte from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP