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Schema
Citing CMDGA
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Annotation type
8
candidate regulatory elements
7
target gene predictions
5
chromatin state
3
accessible chromatin
2
binding sites
1
histone modifications
1
variant allelic effects
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed9
File set status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Biosample type
3
primary cell
2
tissue
Biosample term
5
endothelial cell of umbilical vein
4
foreskin keratinocyte
3
keratinocyte
3
mammary gland epithelial cell
2
breast epithelium
2
bronchial epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
epithelial cell of prostate
2
esophagus squamous epithelium
2
hepatocyte
2
kidney tubule cell
2
myoepithelial cell of mammary gland
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
colon epithelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
iris pigment epithelial cell
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
non-pigmented ciliary epithelial cell
1
pulmonary artery endothelial cell
1
renal cortical epithelial cell
1
retinal pigment epithelial cell
Organ
5
epithelium
3
mammary gland
2
breast
Life stage
4
adult
1
unknown
Date released
5
September, 2022
Software used
5
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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FileSet
DSR267DXB
released
Annotation file set
: Chromatin states for BSS01213 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR285UOJ
released
Annotation file set
: Chromatin states for BSS01211 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR887SUU
released
Annotation file set
: Chromatin states for BSS01209 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR513JAX
released
Annotation file set
: Chromatin states for BSS00146 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR558QXI
released
Annotation file set
: Chromatin states for BSS00145 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP