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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
6
candidate regulatory elements
5
chromatin state
4
target gene predictions
2
accessible chromatin
2
binding sites
1
variant allelic effects
Annotation Category
4
Target gene links
1
Genetic variant effects
Annotation type Category
4
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
4
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
9
endothelial cell
6
hepatocyte
6
keratinocyte
5
endothelial cell of umbilical vein
5
mammary gland epithelial cell
5
pancreatic delta cell
4
colon epithelial cell
4
foreskin keratinocyte
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic ductal cell
3
breast epithelium
3
cortical cell of adrenal gland
3
enterocyte
3
epithelial cell of esophagus
3
epithelial cell of prostate
3
luminal epithelial cell of mammary gland
3
pancreatic A cell
3
type B pancreatic cell
3
type II pneumocyte
2
EndoC_BH1
2
bronchial epithelial cell
2
choroid plexus epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
epithelial cell of proximal tubule
2
esophagus squamous epithelium
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
goblet cell
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney tubule cell
2
mesothelial cell
2
myoepithelial cell of mammary gland
2
pancreatic polypeptide-secreting cell
2
parietal cell
2
peptic cell
2
renal cortical epithelial cell
2
thyroid follicular cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
basal cell of epidermis
1
brain microvascular endothelial cell
1
bronchial goblet cell
1
cardiac endothelial cell
1
club cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of lymphatic vessel
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epidermal melanocyte
1
epithelial cell of amnion
1
foveolar cell of stomach
1
granular cell of epidermis
1
granulosa cell
1
iris pigment epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
myoepithelial cell
1
non keratinizing barrier epithelial cell
1
non-pigmented ciliary epithelial cell
1
paneth cell
1
pulmonary artery endothelial cell
1
respiratory goblet cell
1
retinal pigment epithelial cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
Organ
5
blood vessel
5
epithelium
5
vasculature
5
vein
Life stage
3
newborn
Date released
2
September, 2022
1
March, 2020
1
May, 2020
1
May, 2021
Software used
2
r
1
abc
1
deltasvm
1
hiccups
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR088CRI
released
Annotation file set
: Variant allelic effects of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP