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Citing CMDGA
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Annotation type
16
gene expression
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
11
foreskin keratinocyte
7
endothelial cell of umbilical vein
6
dermis blood vessel endothelial cell
6
esophagus squamous epithelium
5
breast epithelium
5
hepatocyte
4
bronchial epithelial cell
4
epithelial cell of esophagus
4
epithelial cell of prostate
4
keratinocyte
4
mammary gland epithelial cell
4
myoepithelial cell of mammary gland
3
choroid plexus epithelial cell
3
enterocyte
3
epithelial cell of proximal tubule
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
kidney tubule cell
3
lung microvascular endothelial cell
3
mammary epithelial cell
3
renal cortical epithelial cell
2
brain microvascular endothelial cell
2
dermis lymphatic vessel endothelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endothelial cell
2
goblet cell
2
iris pigment epithelial cell
2
kidney capillary endothelial cell
2
non-pigmented ciliary epithelial cell
2
pulmonary artery endothelial cell
2
retinal pigment epithelial cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
EndoC_BH1
1
Liver fetal (hepatocyte)
1
amniotic epithelial cell
1
bronchial goblet cell
1
colon epithelial cell
1
cortical cell of adrenal gland
1
epidermal melanocyte
1
epithelial cell of amnion
1
granulosa cell
luminal epithelial cell of mammary gland
1
luminal epithelial cell of prostatic duct
1
mesothelial cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
thyroid follicular cell
1
type II pneumocyte
Organ
3
epithelium
3
kidney
Life stage
2
unknown
Date released
1
February, 2021
1
May, 2020
1
September, 2022
Software used
1
deltasvm
1
encode-ccres
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
luminal epithelial cell of mammary gland
Showing 3 of 3 results
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Download
FileSet
DSR691IGQ
released
Annotation file set
: Candidate regulatory elements for BSS00310 epithelial cell of proximal tubule from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR711XKR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR347BGE
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney epithelial cell DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP