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Citing CMDGA
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Annotation type
15
gene expression
2
candidate regulatory elements
1
accessible chromatin
1
binding sites
1
chromatin state
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
DNase-seq
1
ChIP-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
20
pigmented layer of retina
9
EndoC_BH1
9
retinal pigment epithelial cell
5
endothelial cell of umbilical vein
5
foreskin keratinocyte
4
hepatocyte
4
kidney tubule cell
4
mammary gland epithelial cell
3
breast epithelium
3
bronchial epithelial cell
3
choroid plexus epithelial cell
3
epithelial cell of prostate
3
esophagus squamous epithelium
3
glomerular endothelial cell
3
glomerular visceral epithelial cell
3
kidney glomerular epithelial cell
3
pancreatic beta cell
3
renal cortical epithelial cell
2
aortic endothelial cell
2
brain microvascular endothelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
epithelial cell of proximal tubule
2
iris pigment epithelial cell
2
keratinocyte
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
myoepithelial cell of mammary gland
2
non-pigmented ciliary epithelial cell
2
pancreatic alpha cell
2
pancreatic ductal cell
2
pulmonary artery endothelial cell
1
colon epithelial cell
1
dermis microvascular lymphatic vessel endothelial cell
1
endothelial cell
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of esophagus
1
glomerular epithelium
1
luminal epithelial cell of mammary gland
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
pancreatic acinar cell
1
pancreatic delta cell
1
renal cortex tubule
1
tracheal epithelial cell
1
urothelial cell
Organ
2
epithelium
2
kidney
Life stage
1
unknown
Date released
1
January, 2020
1
September, 2022
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
Showing 2 of 2 results
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Download
FileSet
DSR412AJP
released
Annotation file set
: Target gene predictions for BSS00310 epithelial cell of proximal tubule from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR184YBQ
released
Annotation file set
: Accessible chromatin annotation of kidney epithelial cell of proximal tubule from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP